Reference

Descriptive and reference material for Binder infrastructure.

• Configuration Files
  • environment.yml - Install a conda environment
  • Pipfile and/or Pipfile.lock - Install a Python environment
  • requirements.txt - Install a Python environment
  • setup.py - Install Python packages
  • Project.toml - Install a Julia environment
  • REQUIRE - Install a Julia environment (legacy)
  • install.R - Install an R/RStudio environment
  • apt.txt - Install packages with apt-get
  • DESCRIPTION - Install an R package
  • postBuild - Run code after installing the environment
  • start - Run code before the user sessions starts
  • runtime.txt - Specifying runtimes
  • default.nix - the nix package manager
  • Dockerfile - Advanced environments
• Example repositories
  • Sample Binder Repositories
    • Managing languages
      • Python environment with a requirements.txt
        • Notes
        • Files in this repository
      • Conda environment with environment.yml
        • Notes
        • Files in this repository
      • python package with setup.py
        • Notes
        • Files in this repository
      • Julia and Python environments
        • Files in this repository
      • Julia Binder demo
        • Files in this repository
      • Specifying an R environment with a runtime.txt file
        • Requirements and suggestions
        • URL addresses for RStudio and Shiny environments
        • Files in this repository
      • Specifying an R environment by having a DESCRIPTION file
        • Files in this repository
      • Octave on mybinder.org
        • Files in this repository
    • User interfaces
      • JupyterLab + Binder
        • Create a Binder link that points to a file in JupyterLab
      • Classic notebook interface on Binder
        • Start classic notebook after you start your Binder
        • Create a Binder link that points to the classic notebook interface
        • Files in this repository
      • Enabling Jupyter Extensions with post-build commands
        • ipywidgets
        • Files in this repository
      • Creating interactive presentations on Binder with RISE
        • Files in this repository
      • Interactive dashboard from notebook with Voilà
        • Configuration
        • JupyterLab Preview Extension for Voilà
        • Files in this repository
      • Interactive apps from Jupyter Notebooks
        • Files in this repository
      • Running a bokeh server with Binder
        • Files in this repository
      • stencila-py
        • Files in this repository
    • System environments
      • Specifying a Python 2 environment with runtime.txt
        • Files in this repository
      • Mixing Python 2 and 3 kernels with runtime.txt
        • Files in this repository
      • Using latex with Binder
        • Files in this repository
      • Installing packages from apt repositories
        • Notes
        • Files in this repository
      • Multi-language demo.
        • Files in this repository
      • Using conda with pip in the same build
        • Files in this repository
    • Data and reproducibility
      • Remote Storage with Binder
        • Notes
        • Files in this repository
      • Run this example
      • Pull data into Binder notebooks
      • How to specify data dependencies in your own Binder
      • Developer
        • Files in this repository
      • Nixpkgs BinderHub example
      • Why Nix?
        • Files in this repository
    • Dockerfile environments
      • Minimal Dockerfiles for Binder
        • Files in this repository
      • Using a Docker image from the Jupyter docker-stacks repository
        • Files in this repository
      • Specifying an R environment with a runtime.txt file
        • Files in this repository
  • Binder repositories from the community
    • Textbooks and teaching
    • Open source software
    • Scientific research and reproducibility